Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.11□□□□□ -0.31
APOC1P02654 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
APOC1P02654 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 BX640514.1-201ENST00000583223 1918 ntBASIC13.11□□□□□ -0.31
APOC1P02654 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC1P02654 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC1P02654 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOC1P02654 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
APOC1P02654 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC1P02654 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC1P02654 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOC1P02654 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC1P02654 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOC1P02654 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
APOC1P02654 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
APOC1P02654 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
APOC1P02654 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.1□□□□□ -0.31
APOC1P02654 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC1P02654 AC022447.6-201ENST00000515522 438 ntBASIC13.1□□□□□ -0.31
APOC1P02654 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.1□□□□□ -0.31
APOC1P02654 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.1□□□□□ -0.31
APOC1P02654 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.1□□□□□ -0.31
APOC1P02654 MIR8072-201ENST00000614241 80 ntBASIC13.1□□□□□ -0.31
APOC1P02654 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.1□□□□□ -0.31
APOC1P02654 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC1P02654 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOC1P02654 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC1P02654 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOC1P02654 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC1P02654 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
APOC1P02654 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.1□□□□□ -0.31
APOC1P02654 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.1□□□□□ -0.31
APOC1P02654 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC1P02654 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOC1P02654 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
APOC1P02654 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
APOC1P02654 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
APOC1P02654 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
APOC1P02654 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 MBLAC2-202ENST00000514906 1936 ntBASIC13.09□□□□□ -0.31
APOC1P02654 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.09□□□□□ -0.31
APOC1P02654 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
APOC1P02654 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.09□□□□□ -0.31
APOC1P02654 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
APOC1P02654 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.09□□□□□ -0.31
APOC1P02654 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 CSPG4P11-201ENST00000560634 4910 ntBASIC13.09□□□□□ -0.31
APOC1P02654 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms