Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PPP1R3DO95685 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
PPP1R3DO95685 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
PPP1R3DO95685 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.33□□□□□ -0.27
PPP1R3DO95685 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PPP1R3DO95685 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
PPP1R3DO95685 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PPP1R3DO95685 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.33□□□□□ -0.28
PPP1R3DO95685 AC087499.6-201ENST00000411576 835 ntBASIC13.33□□□□□ -0.28
PPP1R3DO95685 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.33□□□□□ -0.28
PPP1R3DO95685 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 ELK1P1-201ENST00000485699 580 ntBASIC13.33□□□□□ -0.28
PPP1R3DO95685 GCOM2-201ENST00000509133 1104 ntBASIC13.33□□□□□ -0.28
PPP1R3DO95685 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.33□□□□□ -0.28
PPP1R3DO95685 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.33□□□□□ -0.28
PPP1R3DO95685 ENPP7P5-201ENST00000541031 1031 ntBASIC13.33□□□□□ -0.28
PPP1R3DO95685 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.33□□□□□ -0.28
PPP1R3DO95685 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PPP1R3DO95685 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.33□□□□□ -0.28
PPP1R3DO95685 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.33□□□□□ -0.28
PPP1R3DO95685 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.33□□□□□ -0.28
PPP1R3DO95685 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PPP1R3DO95685 TCAM1P-207ENST00000485295 1537 ntBASIC13.33□□□□□ -0.28
PPP1R3DO95685 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PPP1R3DO95685 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 HSPA8P5-201ENST00000456928 2069 ntBASIC13.32□□□□□ -0.28
PPP1R3DO95685 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 ACKR1-201ENST00000368121 1240 ntBASIC13.32□□□□□ -0.28
PPP1R3DO95685 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 MIR770-201ENST00000390219 98 ntBASIC13.32□□□□□ -0.28
PPP1R3DO95685 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 AL162726.2-201ENST00000438986 1017 ntBASIC13.32□□□□□ -0.28
PPP1R3DO95685 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 AC093433.1-201ENST00000458048 571 ntBASIC13.32□□□□□ -0.28
PPP1R3DO95685 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 CTBP2P3-201ENST00000585629 1255 ntBASIC13.32□□□□□ -0.28
PPP1R3DO95685 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 AC008494.3-201ENST00000606615 944 ntBASIC13.32□□□□□ -0.28
PPP1R3DO95685 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PPP1R3DO95685 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms