Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
POLR1AO95602 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1AO95602 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
POLR1AO95602 RARS-210ENST00000626454 177 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR1AO95602 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1AO95602 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
POLR1AO95602 AC006372.4-201ENST00000624122 1543 ntBASIC20.75■□□□□ 0.91
POLR1AO95602 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
POLR1AO95602 AL513477.1-201ENST00000602865 2407 ntBASIC20.74■□□□□ 0.91
POLR1AO95602 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1AO95602 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1AO95602 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
POLR1AO95602 AC090505.1-201ENST00000430515 1834 ntBASIC20.74■□□□□ 0.91
POLR1AO95602 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC20.74■□□□□ 0.91
POLR1AO95602 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1AO95602 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
POLR1AO95602 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1AO95602 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC20.74■□□□□ 0.91
POLR1AO95602 AC023968.2-201ENST00000560593 1049 ntBASIC20.74■□□□□ 0.91
POLR1AO95602 DRG2-220ENST00000583355 891 ntTSL 3 BASIC20.74■□□□□ 0.91
POLR1AO95602 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1AO95602 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC20.74■□□□□ 0.91
POLR1AO95602 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1AO95602 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1AO95602 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC20.74■□□□□ 0.91
POLR1AO95602 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC20.74■□□□□ 0.91
POLR1AO95602 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
POLR1AO95602 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1AO95602 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.74■□□□□ 0.91
POLR1AO95602 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1AO95602 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC20.74■□□□□ 0.91
POLR1AO95602 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1AO95602 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
POLR1AO95602 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.73■□□□□ 0.91
POLR1AO95602 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 AC098934.1-203ENST00000442868 1262 ntBASIC20.73■□□□□ 0.91
POLR1AO95602 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
POLR1AO95602 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC20.73■□□□□ 0.91
POLR1AO95602 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC20.73■□□□□ 0.91
POLR1AO95602 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
POLR1AO95602 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC20.73■□□□□ 0.91
POLR1AO95602 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 AC005089.1-201ENST00000619486 2241 ntBASIC20.73■□□□□ 0.91
POLR1AO95602 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 HNRNPA1P42-201ENST00000458678 957 ntBASIC20.73■□□□□ 0.91
POLR1AO95602 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC20.73■□□□□ 0.91
POLR1AO95602 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC20.73■□□□□ 0.91
POLR1AO95602 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC20.73■□□□□ 0.91
POLR1AO95602 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1AO95602 LINC00244-201ENST00000625073 613 ntBASIC20.73■□□□□ 0.91
POLR1AO95602 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1AO95602 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1AO95602 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1AO95602 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1AO95602 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1AO95602 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1AO95602 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
POLR1AO95602 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1AO95602 FUCA1P1-201ENST00000374476 1351 ntBASIC20.72■□□□□ 0.91
POLR1AO95602 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1AO95602 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC20.72■□□□□ 0.91
POLR1AO95602 AC018638.5-201ENST00000450885 754 ntBASIC20.72■□□□□ 0.91
POLR1AO95602 AC023906.1-201ENST00000486386 453 ntBASIC20.72■□□□□ 0.91
POLR1AO95602 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC20.72■□□□□ 0.91
POLR1AO95602 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1AO95602 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
POLR1AO95602 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.72■□□□□ 0.91
POLR1AO95602 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1AO95602 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
POLR1AO95602 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR1AO95602 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1AO95602 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1AO95602 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1AO95602 SNX15-201ENST00000352068 771 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR1AO95602 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR1AO95602 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR1AO95602 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms