Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.39□□□□□ -0.11
SIX3O95343 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.39□□□□□ -0.11
SIX3O95343 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.39□□□□□ -0.11
SIX3O95343 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SIX3O95343 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SIX3O95343 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SIX3O95343 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SIX3O95343 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
SIX3O95343 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.39□□□□□ -0.11
SIX3O95343 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.39□□□□□ -0.11
SIX3O95343 AL590440.2-201ENST00000641973 1595 ntBASIC14.39□□□□□ -0.11
SIX3O95343 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SIX3O95343 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
SIX3O95343 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.38□□□□□ -0.11
SIX3O95343 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SIX3O95343 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX3O95343 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.38□□□□□ -0.11
SIX3O95343 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX3O95343 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SIX3O95343 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX3O95343 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 TCAM1P-207ENST00000485295 1537 ntBASIC14.38□□□□□ -0.11
SIX3O95343 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.38□□□□□ -0.11
SIX3O95343 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SIX3O95343 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.38□□□□□ -0.11
SIX3O95343 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.38□□□□□ -0.11
SIX3O95343 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.38□□□□□ -0.11
SIX3O95343 CRB3P1-201ENST00000449338 276 ntBASIC14.38□□□□□ -0.11
SIX3O95343 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.38□□□□□ -0.11
SIX3O95343 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SIX3O95343 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SIX3O95343 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.38□□□□□ -0.11
SIX3O95343 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.38□□□□□ -0.11
SIX3O95343 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SIX3O95343 GNRHR2-203ENST00000581100 1187 ntBASIC14.38□□□□□ -0.11
SIX3O95343 ECM1P1-201ENST00000604092 1279 ntBASIC14.38□□□□□ -0.11
SIX3O95343 BX088702.1-201ENST00000610784 235 ntBASIC14.38□□□□□ -0.11
SIX3O95343 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.38□□□□□ -0.11
SIX3O95343 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.38□□□□□ -0.11
SIX3O95343 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SIX3O95343 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 AC130686.1-201ENST00000622936 2466 ntBASIC14.38□□□□□ -0.11
SIX3O95343 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
SIX3O95343 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX3O95343 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.38□□□□□ -0.11
SIX3O95343 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SIX3O95343 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.38□□□□□ -0.11
SIX3O95343 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIX3O95343 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.37□□□□□ -0.11
SIX3O95343 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
SIX3O95343 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SIX3O95343 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SIX3O95343 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.37□□□□□ -0.11
SIX3O95343 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.37□□□□□ -0.11
SIX3O95343 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SIX3O95343 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SIX3O95343 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX3O95343 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms