Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HCN1O60741 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.83□□□□□ -0.2
HCN1O60741 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.83□□□□□ -0.2
HCN1O60741 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.83□□□□□ -0.2
HCN1O60741 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.83□□□□□ -0.2
HCN1O60741 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.83□□□□□ -0.2
HCN1O60741 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.83□□□□□ -0.2
HCN1O60741 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
HCN1O60741 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 AL138709.1-201ENST00000614840 1693 ntBASIC13.83□□□□□ -0.2
HCN1O60741 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HCN1O60741 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 AC006001.1-201ENST00000325130 474 ntBASIC13.83□□□□□ -0.2
HCN1O60741 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
HCN1O60741 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.83□□□□□ -0.2
HCN1O60741 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.83□□□□□ -0.2
HCN1O60741 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.83□□□□□ -0.2
HCN1O60741 AL355994.2-201ENST00000447882 704 ntBASIC13.83□□□□□ -0.2
HCN1O60741 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.83□□□□□ -0.2
HCN1O60741 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HCN1O60741 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.83□□□□□ -0.2
HCN1O60741 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.83□□□□□ -0.2
HCN1O60741 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.83□□□□□ -0.2
HCN1O60741 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.83□□□□□ -0.2
HCN1O60741 AL603764.1-201ENST00000636452 321 ntBASIC13.83□□□□□ -0.2
HCN1O60741 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.83□□□□□ -0.2
HCN1O60741 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HCN1O60741 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HCN1O60741 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.83□□□□□ -0.2
HCN1O60741 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCN1O60741 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.83□□□□□ -0.2
HCN1O60741 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.82□□□□□ -0.2
HCN1O60741 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
HCN1O60741 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 AL031595.1-201ENST00000623969 4709 ntBASIC13.82□□□□□ -0.2
HCN1O60741 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HCN1O60741 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.82□□□□□ -0.2
HCN1O60741 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
HCN1O60741 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HCN1O60741 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.82□□□□□ -0.2
HCN1O60741 LRRC59-203ENST00000576448 1531 ntBASIC13.82□□□□□ -0.2
HCN1O60741 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.82□□□□□ -0.2
HCN1O60741 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.82□□□□□ -0.2
HCN1O60741 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.82□□□□□ -0.2
HCN1O60741 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.82□□□□□ -0.2
HCN1O60741 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 RNA5SP486-201ENST00000515961 83 ntBASIC13.82□□□□□ -0.2
HCN1O60741 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.82□□□□□ -0.2
HCN1O60741 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.82□□□□□ -0.2
HCN1O60741 DUX4L45-201ENST00000566406 1057 ntBASIC13.82□□□□□ -0.2
HCN1O60741 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.82□□□□□ -0.2
HCN1O60741 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.82□□□□□ -0.2
HCN1O60741 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.82□□□□□ -0.2
HCN1O60741 PEG13-201ENST00000631594 5667 ntBASIC13.82□□□□□ -0.2
HCN1O60741 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HCN1O60741 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HCN1O60741 AL360270.3-201ENST00000609118 1348 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms