Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.57□□□□□ -0.08
TLR4O00206 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TLR4O00206 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TLR4O00206 AC006453.1-201ENST00000636037 1257 ntBASIC14.57□□□□□ -0.08
TLR4O00206 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TLR4O00206 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.57□□□□□ -0.08
TLR4O00206 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TLR4O00206 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.57□□□□□ -0.08
TLR4O00206 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.57□□□□□ -0.08
TLR4O00206 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.57□□□□□ -0.08
TLR4O00206 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.57□□□□□ -0.08
TLR4O00206 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.57□□□□□ -0.08
TLR4O00206 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TLR4O00206 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.57□□□□□ -0.08
TLR4O00206 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
TLR4O00206 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TLR4O00206 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TLR4O00206 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 AC239868.1-201ENST00000369385 493 ntBASIC14.56□□□□□ -0.08
TLR4O00206 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 AC116345.2-201ENST00000512837 523 ntBASIC14.56□□□□□ -0.08
TLR4O00206 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 IGLV3-15-201ENST00000518356 244 ntBASIC14.56□□□□□ -0.08
TLR4O00206 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.56□□□□□ -0.08
TLR4O00206 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.56□□□□□ -0.08
TLR4O00206 AC242376.1-201ENST00000559033 726 ntBASIC14.56□□□□□ -0.08
TLR4O00206 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.56□□□□□ -0.08
TLR4O00206 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TLR4O00206 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.56□□□□□ -0.08
TLR4O00206 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.56□□□□□ -0.08
TLR4O00206 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.56□□□□□ -0.08
TLR4O00206 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 AGAP7P-201ENST00000582299 2062 ntBASIC14.56□□□□□ -0.08
TLR4O00206 AGAP14-201ENST00000624701 2060 ntBASIC14.56□□□□□ -0.08
TLR4O00206 AC026748.1-201ENST00000624349 3251 ntBASIC14.56□□□□□ -0.08
TLR4O00206 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.56□□□□□ -0.08
TLR4O00206 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.56□□□□□ -0.08
TLR4O00206 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.56□□□□□ -0.08
TLR4O00206 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.56□□□□□ -0.08
TLR4O00206 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TLR4O00206 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.56□□□□□ -0.08
TLR4O00206 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TLR4O00206 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TLR4O00206 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TLR4O00206 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TLR4O00206 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TLR4O00206 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
TLR4O00206 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TLR4O00206 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms