Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 AL662890.1-201ENST00000396818 632 ntBASIC15.3■□□□□ 0.04
SRRM3A6NNA2 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 KRT8P12-202ENST00000472924 1397 ntBASIC15.3■□□□□ 0.04
SRRM3A6NNA2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.3■□□□□ 0.04
SRRM3A6NNA2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.29■□□□□ 0.04
SRRM3A6NNA2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 AL162726.2-201ENST00000438986 1017 ntBASIC15.29■□□□□ 0.04
SRRM3A6NNA2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 EIF4HP1-201ENST00000453115 687 ntBASIC15.29■□□□□ 0.04
SRRM3A6NNA2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 AC092337.1-201ENST00000568699 1129 ntBASIC15.29■□□□□ 0.04
SRRM3A6NNA2 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 AC244452.3-201ENST00000636814 210 ntBASIC15.29■□□□□ 0.04
SRRM3A6NNA2 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM3A6NNA2 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms