Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 AC244394.1-201ENST00000435000 1665 ntBASIC13.95□□□□□ -0.18
LRIT2A6NDA9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.95□□□□□ -0.18
LRIT2A6NDA9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 RPL13AP20-201ENST00000459725 609 ntBASIC13.95□□□□□ -0.18
LRIT2A6NDA9 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 MIR6720-201ENST00000611664 98 ntBASIC13.95□□□□□ -0.18
LRIT2A6NDA9 AL162426.1-201ENST00000624141 743 ntBASIC13.95□□□□□ -0.18
LRIT2A6NDA9 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.95□□□□□ -0.18
LRIT2A6NDA9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRIT2A6NDA9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 AL157407.1-201ENST00000435784 904 ntBASIC13.94□□□□□ -0.18
LRIT2A6NDA9 FAM58BP-201ENST00000439056 645 ntBASIC13.94□□□□□ -0.18
LRIT2A6NDA9 AL645933.1-201ENST00000440087 609 ntBASIC13.94□□□□□ -0.18
LRIT2A6NDA9 MTX1P1-201ENST00000440904 838 ntBASIC13.94□□□□□ -0.18
LRIT2A6NDA9 GOLGA2P4-201ENST00000441462 777 ntBASIC13.94□□□□□ -0.18
LRIT2A6NDA9 HSPB1P2-201ENST00000448722 546 ntBASIC13.94□□□□□ -0.18
LRIT2A6NDA9 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.94□□□□□ -0.18
LRIT2A6NDA9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRIT2A6NDA9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms