Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM129A0AVI4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TMEM129A0AVI4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM129A0AVI4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM129A0AVI4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TMEM129A0AVI4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM129A0AVI4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM129A0AVI4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM129A0AVI4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM129A0AVI4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM129A0AVI4 AC215219.1-201ENST00000400706 1817 ntBASIC13.34□□□□□ -0.27
TMEM129A0AVI4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.34□□□□□ -0.27
TMEM129A0AVI4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 GK-202ENST00000378941 458 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 AC134915.1-201ENST00000426461 574 ntBASIC13.34□□□□□ -0.27
TMEM129A0AVI4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 AL049840.4-201ENST00000602422 811 ntBASIC13.34□□□□□ -0.27
TMEM129A0AVI4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 AC090643.2-201ENST00000623442 2029 ntBASIC13.34□□□□□ -0.27
TMEM129A0AVI4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM129A0AVI4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TMEM129A0AVI4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.33□□□□□ -0.27
TMEM129A0AVI4 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.33□□□□□ -0.27
TMEM129A0AVI4 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
TMEM129A0AVI4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TMEM129A0AVI4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TMEM129A0AVI4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TMEM129A0AVI4 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.33□□□□□ -0.27
TMEM129A0AVI4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.33□□□□□ -0.27
TMEM129A0AVI4 COL6A4P2-202ENST00000504443 2753 ntBASIC13.33□□□□□ -0.27
TMEM129A0AVI4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 VDAC1P7-201ENST00000462417 847 ntBASIC13.33□□□□□ -0.28
TMEM129A0AVI4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 AC124283.3-201ENST00000570869 594 ntBASIC13.33□□□□□ -0.28
TMEM129A0AVI4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.33□□□□□ -0.28
TMEM129A0AVI4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 FAM90A12P-201ENST00000519497 2375 ntBASIC13.33□□□□□ -0.28
TMEM129A0AVI4 FAM90A24P-201ENST00000520792 2369 ntBASIC13.33□□□□□ -0.28
TMEM129A0AVI4 AL356585.2-201ENST00000625078 2396 ntBASIC13.33□□□□□ -0.28
TMEM129A0AVI4 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM129A0AVI4 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms