Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC107464.3-201ENST00000609172 737 ntBASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AL022334.2-201ENST00000610000 484 ntBASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AL161773.1-201ENST00000624845 863 ntBASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AL132780.4-201ENST00000624870 1135 ntBASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AL590440.2-201ENST00000641973 1595 ntBASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AC126177.1-201ENST00000547829 2218 ntBASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 SSR4P1-203ENST00000599569 2260 ntBASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 AC092638.2-201ENST00000441105 947 ntBASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 PIN4P1-201ENST00000451079 396 ntBASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 AL157792.1-201ENST00000488281 530 ntBASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 AC073911.3-201ENST00000624401 631 ntBASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 AP001184.1-201ENST00000637936 376 ntBASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC187A0A096LP49 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 TMBIM7P-203ENST00000641617 1718 ntBASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 AC099063.4-201ENST00000641099 1602 ntBASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms