Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 U3.5-201ENST00000363448 216 ntBASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 HLA-DPA2-205ENST00000433582 733 ntBASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 AC092896.1-201ENST00000465850 380 ntBASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 AC092903.1-201ENST00000466506 262 ntBASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 IGHEP2-201ENST00000519308 1256 ntBASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 KNOP1P1-201ENST00000542108 989 ntBASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
BIVM-ERCC5R4GMW8 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 MBP-238ENST00000580402 915 ntTSL 5 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BIVM-ERCC5R4GMW8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 OR51A9P-201ENST00000422578 911 ntBASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 SEPHS2P1-201ENST00000511618 1162 ntBASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
BIVM-ERCC5R4GMW8 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 RPS18P9-201ENST00000482817 460 ntBASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 CD44-224ENST00000526669 870 ntTSL 5 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 GARS-210ENST00000627489 324 ntTSL 4 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BIVM-ERCC5R4GMW8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC23.54■■□□□ 1.36
BIVM-ERCC5R4GMW8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
BIVM-ERCC5R4GMW8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC23.54■■□□□ 1.36
BIVM-ERCC5R4GMW8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms