Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGC4Q9Y5F7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGC4Q9Y5F7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGC4Q9Y5F7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGC4Q9Y5F7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGC4Q9Y5F7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGC4Q9Y5F7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGC4Q9Y5F7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGC4Q9Y5F7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AC018735.1-201ENST00000437208 1502 ntBASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AC104306.2-201ENST00000451877 341 ntBASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 MIR6720-201ENST00000611664 98 ntBASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGC4Q9Y5F7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 RNMTL1P1-201ENST00000454103 560 ntBASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 AL118558.3-201ENST00000607414 1079 ntBASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 AC007663.3-201ENST00000609632 465 ntBASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms