Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 AC013726.1-201ENST00000563747 2285 ntBASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 HINT2P1-201ENST00000419438 481 ntBASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 AC006122.1-201ENST00000493323 440 ntBASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 RTN3P1-201ENST00000536295 711 ntBASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 AL353770.1-201ENST00000614915 403 ntBASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTDP1Q9Y5B0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 AC239868.1-201ENST00000369385 493 ntBASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 AL645933.1-201ENST00000440087 609 ntBASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 EEF1DP6-201ENST00000449232 372 ntBASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 AC079336.7-201ENST00000623428 1078 ntBASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CTDP1Q9Y5B0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTDP1Q9Y5B0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTDP1Q9Y5B0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.96■□□□□ 0.3
CTDP1Q9Y5B0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 CICP23-201ENST00000605013 2741 ntBASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms