Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 AL662844.1-201ENST00000546340 181 ntBASIC13.94□□□□□ -0.18
AP4S1Q9Y587 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.94□□□□□ -0.18
AP4S1Q9Y587 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 AC135782.3-201ENST00000562782 2105 ntBASIC13.94□□□□□ -0.18
AP4S1Q9Y587 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP4S1Q9Y587 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 AL645937.2-201ENST00000396808 931 ntBASIC13.93□□□□□ -0.18
AP4S1Q9Y587 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 ACTG1P14-201ENST00000446382 1122 ntBASIC13.93□□□□□ -0.18
AP4S1Q9Y587 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 RN7SL510P-201ENST00000581311 263 ntBASIC13.93□□□□□ -0.18
AP4S1Q9Y587 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.93□□□□□ -0.18
AP4S1Q9Y587 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms