Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 DUX4L47-201ENST00000566374 394 ntBASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 CTBP2P3-201ENST00000585629 1255 ntBASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 AL033527.5-201ENST00000641382 801 ntBASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
POLR1DQ9Y2S0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 AL136172.1-201ENST00000598590 1394 ntBASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 MIR661-201ENST00000384842 89 ntBASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 TPT1P11-201ENST00000458482 498 ntBASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 AL355385.1-201ENST00000606123 409 ntBASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 AP001267.2-201ENST00000532619 2086 ntBASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms