Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 AL590440.2-201ENST00000641973 1595 ntBASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 AL590235.1-201ENST00000564650 861 ntBASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H4Q9UPT8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 LILRP1-201ENST00000444199 1370 ntBASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 SCARNA12-201ENST00000459155 270 ntBASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 IGHV1-12-201ENST00000518307 205 ntBASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 AL160191.2-201ENST00000603975 601 ntBASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H4Q9UPT8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.52■□□□□ 0.4
ZC3H4Q9UPT8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H4Q9UPT8 KRT8P28-201ENST00000433288 1390 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms