Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 UPF3AP3-201ENST00000420996 769 ntBASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 MCCD1P2-201ENST00000423228 335 ntBASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 AC243562.2-201ENST00000561247 970 ntBASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 MKRN5P-201ENST00000445263 1467 ntBASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 AC007787.1-201ENST00000588095 1583 ntBASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 AL031719.1-201ENST00000623365 2587 ntBASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 AC022400.8-201ENST00000623453 3599 ntBASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 PTPRVP-205ENST00000641549 5067 ntBASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBQLN2Q9UHD9 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 AC012617.1-204ENST00000586340 2305 ntBASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 AOC4P-203ENST00000566825 2289 ntBASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms