Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 AC079781.5-202ENST00000641784 3743 ntBASIC13.84□□□□□ -0.19
CTSFQ9UBX1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 AC015656.1-201ENST00000624209 3578 ntBASIC13.84□□□□□ -0.19
CTSFQ9UBX1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.84□□□□□ -0.19
CTSFQ9UBX1 ACTG1P2-201ENST00000415776 1125 ntBASIC13.84□□□□□ -0.19
CTSFQ9UBX1 ACTG1P11-201ENST00000425411 1125 ntBASIC13.84□□□□□ -0.19
CTSFQ9UBX1 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 RN7SL11P-201ENST00000471305 293 ntBASIC13.84□□□□□ -0.19
CTSFQ9UBX1 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 HLA-J-204ENST00000495278 958 ntBASIC13.84□□□□□ -0.19
CTSFQ9UBX1 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 AL160314.3-201ENST00000556041 767 ntBASIC13.84□□□□□ -0.19
CTSFQ9UBX1 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.84□□□□□ -0.19
CTSFQ9UBX1 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 TUBBP5-203ENST00000508529 1334 ntBASIC13.84□□□□□ -0.19
CTSFQ9UBX1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSFQ9UBX1 FAM90A7P-201ENST00000382628 1395 ntBASIC13.83□□□□□ -0.19
CTSFQ9UBX1 FAM90A23P-201ENST00000400136 1395 ntBASIC13.83□□□□□ -0.19
CTSFQ9UBX1 KRT8P28-201ENST00000433288 1390 ntBASIC13.83□□□□□ -0.19
CTSFQ9UBX1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CTSFQ9UBX1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CTSFQ9UBX1 AL590440.2-201ENST00000641973 1595 ntBASIC13.83□□□□□ -0.19
CTSFQ9UBX1 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CTSFQ9UBX1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CTSFQ9UBX1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.83□□□□□ -0.19
CTSFQ9UBX1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CTSFQ9UBX1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
CTSFQ9UBX1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.83□□□□□ -0.19
CTSFQ9UBX1 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CTSFQ9UBX1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 MIR769-201ENST00000390225 118 ntBASIC13.83□□□□□ -0.2
CTSFQ9UBX1 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.83□□□□□ -0.2
CTSFQ9UBX1 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 AC125604.1-201ENST00000496255 707 ntBASIC13.83□□□□□ -0.2
CTSFQ9UBX1 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
CTSFQ9UBX1 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms