Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 TSSK5P-201ENST00000423978 907 ntBASIC16.45■□□□□ 0.22
CBX8Q9HC52 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 AC140878.1-201ENST00000565277 250 ntBASIC16.45■□□□□ 0.22
CBX8Q9HC52 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 BTBD7P1-201ENST00000447253 1453 ntBASIC16.45■□□□□ 0.22
CBX8Q9HC52 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 AC139712.1-201ENST00000378256 1875 ntBASIC16.45■□□□□ 0.22
CBX8Q9HC52 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX8Q9HC52 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX8Q9HC52 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 OS9-218ENST00000551035 2246 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX8Q9HC52 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 RN7SKP230-201ENST00000365642 335 ntBASIC16.44■□□□□ 0.22
CBX8Q9HC52 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 GIMAP3P-201ENST00000495150 836 ntBASIC16.44■□□□□ 0.22
CBX8Q9HC52 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX8Q9HC52 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX8Q9HC52 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX8Q9HC52 AC004790.1-201ENST00000612686 536 ntBASIC16.44■□□□□ 0.22
CBX8Q9HC52 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX8Q9HC52 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX8Q9HC52 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CBX8Q9HC52 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 KLF2P2-201ENST00000416807 1039 ntBASIC16.43■□□□□ 0.22
CBX8Q9HC52 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 AC107890.1-201ENST00000422478 521 ntBASIC16.43■□□□□ 0.22
CBX8Q9HC52 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 BRI3BPP1-201ENST00000594224 787 ntBASIC16.43■□□□□ 0.22
CBX8Q9HC52 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 AC023511.2-201ENST00000618803 211 ntBASIC16.43■□□□□ 0.22
CBX8Q9HC52 AC007431.3-201ENST00000623221 587 ntBASIC16.43■□□□□ 0.22
CBX8Q9HC52 AC004840.1-201ENST00000636359 365 ntBASIC16.43■□□□□ 0.22
CBX8Q9HC52 AL603764.1-201ENST00000636452 321 ntBASIC16.43■□□□□ 0.22
CBX8Q9HC52 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms