Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 AC004554.1-201ENST00000422830 1468 ntBASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 AL645933.1-201ENST00000440087 609 ntBASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 BRI3P1-201ENST00000440440 378 ntBASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 AC005041.3-201ENST00000606287 649 ntBASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 AC068587.6-202ENST00000641839 5619 ntBASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 NORAD-201ENST00000565493 5339 ntBASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2OQ9C0C9 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 DPY19L2P5-201ENST00000456300 331 ntBASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 MIR3188-201ENST00000583494 85 ntBASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 AC233280.19-201ENST00000633223 136 ntBASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 AC105250.1-201ENST00000509378 2057 ntBASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 AP002414.2-201ENST00000591780 3365 ntBASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2OQ9C0C9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
UBE2OQ9C0C9 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
UBE2OQ9C0C9 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms