Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 RN7SL692P-201ENST00000464677 288 ntBASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 COX5BP1-201ENST00000507622 393 ntBASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 AC009093.10-201ENST00000641956 1442 ntBASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 AC020658.7-201ENST00000624274 2442 ntBASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 KRT8P4-201ENST00000509735 1454 ntBASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 AC015909.5-201ENST00000624336 2266 ntBASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 AGAP12P-201ENST00000585227 2359 ntBASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 AC016694.1-201ENST00000434179 700 ntBASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 TTTY23B-201ENST00000442790 549 ntBASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 AC007551.1-201ENST00000457394 519 ntBASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 AC027601.3-201ENST00000622907 509 ntBASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
RSPO3Q9BXY4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms