Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 AC114271.1-201ENST00000612689 2813 ntBASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 AC127383.1-201ENST00000444697 1800 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 CICP16-201ENST00000502609 2813 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 MIR1908-201ENST00000410394 80 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 C2orf27AP3-201ENST00000434123 579 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 KRT90P-201ENST00000549264 1064 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 MIR4313-201ENST00000580760 101 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 RN7SL219P-201ENST00000582872 296 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 AC244669.2-201ENST00000612320 853 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 AL354718.3-201ENST00000616414 581 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 CR382287.1-201ENST00000623954 586 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 RHOXF1P1-202ENST00000635473 501 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 AC073548.1-201ENST00000624088 1882 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 INTS4P1-203ENST00000641008 3683 ntBASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF4Q9BUZ4 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 KRT8P24-201ENST00000560290 1559 ntBASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 YBX1P6-201ENST00000442962 1002 ntBASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 GAPDHP40-201ENST00000505218 1006 ntBASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 GNRHR2-203ENST00000581100 1187 ntBASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 MIR4538-201ENST00000581377 78 ntBASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAF4Q9BUZ4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms