Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 MIR5196-201ENST00000578146 115 ntBASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 AC002044.2-201ENST00000624910 970 ntBASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 BX679664.3-201ENST00000414070 555 ntBASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 AC113935.1-201ENST00000471722 555 ntBASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 AL161773.1-201ENST00000624845 863 ntBASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 SLC25A15P3-201ENST00000505530 290 ntBASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 MIR4750-201ENST00000584564 56 ntBASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 MIR6858-201ENST00000620733 67 ntBASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP2Q96SN8 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 AC025271.4-201ENST00000621477 1726 ntBASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 AC106881.1-201ENST00000605849 3329 ntBASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 AC103702.1-201ENST00000548801 2630 ntBASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 AL354861.1-201ENST00000445213 355 ntBASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 BAP1-211ENST00000615113 489 ntBASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 AC105137.3-201ENST00000617588 984 ntBASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP2Q96SN8 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 AP000911.2-201ENST00000534330 502 ntBASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 HERC2P11-201ENST00000562845 725 ntBASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 AC100756.2-201ENST00000569537 736 ntBASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms