Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 FAM90A21P-201ENST00000510875 1396 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 FAM90A15P-201ENST00000514465 1395 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 FAM90A6P-201ENST00000515148 1394 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 FAM90A16P-201ENST00000526662 1395 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 FAM90A9P-201ENST00000527940 1395 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 FAM90A5P-201ENST00000528738 1395 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 FAM90A14P-201ENST00000530386 1395 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 FAM90A13P-201ENST00000534703 1395 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 CCT8L1P-201ENST00000465400 1674 ntBASIC17.64■□□□□ 0.42
CRAMP1Q96RY5 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.64■□□□□ 0.42
CRAMP1Q96RY5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CRAMP1Q96RY5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 MYADML-201ENST00000474610 2147 ntBASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 AC005740.1-201ENST00000515639 522 ntBASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 AC055811.3-201ENST00000584952 686 ntBASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 LINC00554-201ENST00000564841 3011 ntBASIC17.64■□□□□ 0.41
CRAMP1Q96RY5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 RN7SL788P-201ENST00000460504 316 ntBASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 RN7SL494P-201ENST00000461517 304 ntBASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 PGAM1P12-201ENST00000505622 748 ntBASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 FAM86B3P-203ENST00000523992 854 ntBASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 AC145285.5-201ENST00000562217 361 ntBASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 AC091951.1-201ENST00000512854 2465 ntBASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.63■□□□□ 0.41
CRAMP1Q96RY5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms