Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC078991.1-201ENST00000437297 610 ntBASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 RN7SL818P-201ENST00000485099 259 ntBASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 PHBP15-201ENST00000574228 665 ntBASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 RN7SL725P-201ENST00000606439 259 ntBASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 AC092171.5-201ENST00000608012 942 ntBASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 RN7SL736P-201ENST00000613111 269 ntBASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 LINC01783-202ENST00000614408 828 ntBASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 BX284668.2-205ENST00000619677 828 ntBASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 YRDCP1-201ENST00000621419 643 ntBASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNGAP1Q96PV0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SYNGAP1Q96PV0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
SYNGAP1Q96PV0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
SYNGAP1Q96PV0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.64■□□□□ 0.26
SYNGAP1Q96PV0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SYNGAP1Q96PV0 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SYNGAP1Q96PV0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.64■□□□□ 0.26
SYNGAP1Q96PV0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SYNGAP1Q96PV0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 AC074138.1-201ENST00000611182 1303 ntBASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 KRT18P36-201ENST00000411618 1276 ntBASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 RPL8P2-201ENST00000430538 502 ntBASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 AL031713.1-201ENST00000564813 661 ntBASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 AC138894.2-201ENST00000602838 371 ntBASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 AC087045.2-201ENST00000606279 1003 ntBASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 AC007718.1-201ENST00000621078 280 ntBASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 CICP24-201ENST00000605464 2705 ntBASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNGAP1Q96PV0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 LINC01165-201ENST00000445190 1623 ntBASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 AGAP7P-201ENST00000582299 2062 ntBASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 AGAP14-201ENST00000624701 2060 ntBASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 AC018629.1-201ENST00000623381 1736 ntBASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SYNGAP1Q96PV0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms