Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 FAM58BP-201ENST00000439056 645 ntBASIC12.2□□□□□ -0.46
GAFA1Q96PS6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 AC005695.3-201ENST00000614522 232 ntBASIC12.2□□□□□ -0.46
GAFA1Q96PS6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 Z98259.2-201ENST00000641583 609 ntBASIC12.2□□□□□ -0.46
GAFA1Q96PS6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 AC068418.2-201ENST00000577309 3703 ntBASIC12.2□□□□□ -0.46
GAFA1Q96PS6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 TMBIM7P-202ENST00000641474 1516 ntBASIC12.2□□□□□ -0.46
GAFA1Q96PS6 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 AC026748.1-201ENST00000624349 3251 ntBASIC12.2□□□□□ -0.46
GAFA1Q96PS6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.2□□□□□ -0.46
GAFA1Q96PS6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AL008718.2-201ENST00000609206 1313 ntBASIC12.19□□□□□ -0.46
GAFA1Q96PS6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AL591846.1-201ENST00000451736 433 ntBASIC12.19□□□□□ -0.46
GAFA1Q96PS6 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 AC091271.1-201ENST00000611877 1162 ntBASIC12.19□□□□□ -0.46
GAFA1Q96PS6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.19□□□□□ -0.46
GAFA1Q96PS6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms