Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC018629.1-201ENST00000623381 1736 ntBASIC15.8■□□□□ 0.12
SNX27Q96L92 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SNX27Q96L92 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SNX27Q96L92 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SNX27Q96L92 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.8■□□□□ 0.12
SNX27Q96L92 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.8■□□□□ 0.12
SNX27Q96L92 AL596276.2-201ENST00000447525 331 ntBASIC15.8■□□□□ 0.12
SNX27Q96L92 AL133466.1-201ENST00000447582 150 ntBASIC15.8■□□□□ 0.12
SNX27Q96L92 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.8■□□□□ 0.12
SNX27Q96L92 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX27Q96L92 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.8■□□□□ 0.12
SNX27Q96L92 MIR3907-201ENST00000579424 151 ntBASIC15.8■□□□□ 0.12
SNX27Q96L92 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SNX27Q96L92 AC079336.7-201ENST00000623428 1078 ntBASIC15.8■□□□□ 0.12
SNX27Q96L92 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.8■□□□□ 0.12
SNX27Q96L92 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX27Q96L92 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SNX27Q96L92 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 MYADML-201ENST00000474610 2147 ntBASIC15.8■□□□□ 0.12
SNX27Q96L92 AGGF1P1-201ENST00000509500 2073 ntBASIC15.8■□□□□ 0.12
SNX27Q96L92 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
SNX27Q96L92 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX27Q96L92 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.8■□□□□ 0.12
SNX27Q96L92 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX27Q96L92 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.8■□□□□ 0.12
SNX27Q96L92 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 AL157791.1-201ENST00000553667 1699 ntBASIC15.79■□□□□ 0.12
SNX27Q96L92 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
SNX27Q96L92 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.79■□□□□ 0.12
SNX27Q96L92 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.79■□□□□ 0.12
SNX27Q96L92 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNX27Q96L92 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNX27Q96L92 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SNX27Q96L92 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.79■□□□□ 0.12
SNX27Q96L92 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.79■□□□□ 0.12
SNX27Q96L92 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SNX27Q96L92 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.79■□□□□ 0.12
SNX27Q96L92 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SNX27Q96L92 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.79■□□□□ 0.12
SNX27Q96L92 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.79■□□□□ 0.12
SNX27Q96L92 AC097065.1-201ENST00000425737 517 ntBASIC15.79■□□□□ 0.12
SNX27Q96L92 XBP1P1-201ENST00000436573 652 ntBASIC15.79■□□□□ 0.12
SNX27Q96L92 EEF1DP6-201ENST00000449232 372 ntBASIC15.79■□□□□ 0.12
SNX27Q96L92 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.79■□□□□ 0.12
SNX27Q96L92 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 AC022447.6-201ENST00000515522 438 ntBASIC15.79■□□□□ 0.12
SNX27Q96L92 AC024681.1-201ENST00000521917 487 ntBASIC15.79■□□□□ 0.12
SNX27Q96L92 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.79■□□□□ 0.12
SNX27Q96L92 AC003686.1-201ENST00000550956 1034 ntBASIC15.79■□□□□ 0.12
SNX27Q96L92 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.79■□□□□ 0.12
SNX27Q96L92 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SNX27Q96L92 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SNX27Q96L92 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.79■□□□□ 0.12
SNX27Q96L92 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
SNX27Q96L92 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.79■□□□□ 0.12
SNX27Q96L92 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.79■□□□□ 0.12
SNX27Q96L92 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SNX27Q96L92 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNX27Q96L92 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SNX27Q96L92 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SNX27Q96L92 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.78■□□□□ 0.12
SNX27Q96L92 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SNX27Q96L92 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 CICP24-201ENST00000605464 2705 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms