Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 AC067750.1-201ENST00000608826 6545 ntBASIC14.27□□□□□ -0.13
RNF31Q96EP0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.27□□□□□ -0.13
RNF31Q96EP0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 AL645937.2-201ENST00000396808 931 ntBASIC14.26□□□□□ -0.13
RNF31Q96EP0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 FTLP10-202ENST00000505798 471 ntBASIC14.26□□□□□ -0.13
RNF31Q96EP0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 MIR4783-201ENST00000580343 82 ntBASIC14.26□□□□□ -0.13
RNF31Q96EP0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 AL358472.3-201ENST00000608147 415 ntBASIC14.26□□□□□ -0.13
RNF31Q96EP0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF31Q96EP0 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF31Q96EP0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 TMBIM7P-203ENST00000641617 1718 ntBASIC14.25□□□□□ -0.13
RNF31Q96EP0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.25□□□□□ -0.13
RNF31Q96EP0 AC016700.1-201ENST00000429424 312 ntBASIC14.25□□□□□ -0.13
RNF31Q96EP0 AC004898.1-201ENST00000451057 766 ntBASIC14.25□□□□□ -0.13
RNF31Q96EP0 AC104073.2-201ENST00000453737 312 ntBASIC14.25□□□□□ -0.13
RNF31Q96EP0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 RN7SL11P-201ENST00000471305 293 ntBASIC14.25□□□□□ -0.13
RNF31Q96EP0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF31Q96EP0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 AC126915.1-201ENST00000522847 1038 ntBASIC14.25□□□□□ -0.13
RNF31Q96EP0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
RNF31Q96EP0 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms