Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 AC020910.5-201ENST00000623668 1865 ntBASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 AC072061.1-201ENST00000569710 2234 ntBASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 CLUHP2-201ENST00000426660 1303 ntBASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 AC004945.1-201ENST00000416738 983 ntBASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 AC098850.1-201ENST00000419919 790 ntBASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 ALG3P1-201ENST00000508806 1114 ntBASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 AC005498.2-205ENST00000593218 784 ntBASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 DGCR9-201ENST00000609630 2415 ntBASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 AL122018.1-201ENST00000446607 2310 ntBASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 AC099521.3-201ENST00000624251 2938 ntBASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 KRT18P25-201ENST00000508931 1278 ntBASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 CLUHP6-201ENST00000580789 941 ntBASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 AC133539.2-201ENST00000604757 467 ntBASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC44A1Q8WWI5 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 AC064801.2-201ENST00000625052 1303 ntBASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC44A1Q8WWI5 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms