Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 AC025279.2-201ENST00000569730 653 ntBASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 FKBP4P6-201ENST00000457486 1332 ntBASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 AC020910.5-201ENST00000623668 1865 ntBASIC13.53□□□□□ -0.24
LSMEM1Q8N8F7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LSMEM1Q8N8F7 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 AL355864.2-201ENST00000447420 863 ntBASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 AC007389.4-201ENST00000454674 793 ntBASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 AC106760.1-201ENST00000508690 800 ntBASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 GNRHR2-203ENST00000581100 1187 ntBASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 AC015936.2-201ENST00000593177 259 ntBASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 KHSRPP1-201ENST00000427983 1768 ntBASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 RN7SL832P-201ENST00000607781 1756 ntBASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 AC215219.1-201ENST00000400706 1817 ntBASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LSMEM1Q8N8F7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms