Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AC007952.5-201ENST00000572818 1486 ntBASIC22.55■■□□□ 1.2
VPS8Q8N3P4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 EEF1DP6-201ENST00000449232 372 ntBASIC22.54■■□□□ 1.2
VPS8Q8N3P4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 FTH1P22-201ENST00000456305 520 ntBASIC22.54■■□□□ 1.2
VPS8Q8N3P4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 AL512310.5-201ENST00000551999 515 ntBASIC22.54■■□□□ 1.2
VPS8Q8N3P4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 AC016629.1-201ENST00000596579 586 ntBASIC22.54■■□□□ 1.2
VPS8Q8N3P4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 AC051619.9-201ENST00000623237 597 ntBASIC22.54■■□□□ 1.2
VPS8Q8N3P4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 HSPA7-201ENST00000445535 1927 ntBASIC22.54■■□□□ 1.2
VPS8Q8N3P4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS8Q8N3P4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 KRT18P9-201ENST00000604826 1300 ntBASIC22.53■■□□□ 1.2
VPS8Q8N3P4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 AC103592.1-201ENST00000394513 664 ntBASIC22.53■■□□□ 1.2
VPS8Q8N3P4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 AC008723.1-201ENST00000506922 207 ntBASIC22.53■■□□□ 1.2
VPS8Q8N3P4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS8Q8N3P4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 AC023908.3-201ENST00000564211 3047 ntBASIC22.52■■□□□ 1.2
VPS8Q8N3P4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 AC128714.1-201ENST00000637035 887 ntBASIC22.52■■□□□ 1.2
VPS8Q8N3P4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 MARK2P16-201ENST00000605714 1723 ntBASIC22.52■■□□□ 1.2
VPS8Q8N3P4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS8Q8N3P4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 IGLV3-15-201ENST00000518356 244 ntBASIC22.51■■□□□ 1.19
VPS8Q8N3P4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms