Protein–RNA interactions for Protein: Q8IWT3

CUL9, Cullin-9, humanhuman

Predictions only

Length 2,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9Q8IWT3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 AP001094.4-201ENST00000579008 2176 ntBASIC14.33□□□□□ -0.12
CUL9Q8IWT3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 AC010524.1-201ENST00000596488 494 ntTSL 3 BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CUL9Q8IWT3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 PDXDC2P-206ENST00000534700 1315 ntBASIC14.32□□□□□ -0.12
CUL9Q8IWT3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 RPL3P9-201ENST00000463217 1183 ntBASIC14.32□□□□□ -0.12
CUL9Q8IWT3 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 AL137028.1-201ENST00000620521 555 ntBASIC14.32□□□□□ -0.12
CUL9Q8IWT3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUL9Q8IWT3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 PRDX3P2-201ENST00000447051 611 ntBASIC14.31□□□□□ -0.12
CUL9Q8IWT3 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 AC005740.1-201ENST00000515639 522 ntBASIC14.31□□□□□ -0.12
CUL9Q8IWT3 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 AC123912.6-201ENST00000612657 315 ntBASIC14.31□□□□□ -0.12
CUL9Q8IWT3 MIR6880-201ENST00000622851 62 ntBASIC14.31□□□□□ -0.12
CUL9Q8IWT3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 RAB13-201ENST00000368575 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 AC009238.3-201ENST00000512705 217 ntBASIC14.31□□□□□ -0.12
CUL9Q8IWT3 AC105424.1-201ENST00000514583 209 ntBASIC14.31□□□□□ -0.12
CUL9Q8IWT3 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC14.31□□□□□ -0.12
CUL9Q8IWT3 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC14.31□□□□□ -0.12
CUL9Q8IWT3 KF455155.1-201ENST00000604493 303 ntBASIC14.31□□□□□ -0.12
CUL9Q8IWT3 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.31□□□□□ -0.12
CUL9Q8IWT3 AC090386.2-201ENST00000623010 1039 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms