Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 OR2I1P-209ENST00000641730 5365 ntBASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 AC011498.7-201ENST00000624986 2027 ntBASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 MIR4783-201ENST00000580343 82 ntBASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11FIP4Q86YS3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 AC215219.1-201ENST00000400706 1817 ntBASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 AL136309.1-201ENST00000403917 691 ntBASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 PUDPP3-201ENST00000445368 636 ntBASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 RPL13AP20-201ENST00000459725 609 ntBASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 ZACNP1-201ENST00000612259 710 ntBASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11FIP4Q86YS3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RAB11FIP4Q86YS3 AC015802.1-201ENST00000588104 1449 ntBASIC17.27■□□□□ 0.35
RAB11FIP4Q86YS3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RAB11FIP4Q86YS3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB11FIP4Q86YS3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB11FIP4Q86YS3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB11FIP4Q86YS3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB11FIP4Q86YS3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RAB11FIP4Q86YS3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RAB11FIP4Q86YS3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB11FIP4Q86YS3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.27■□□□□ 0.35
RAB11FIP4Q86YS3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 YBX1P6-201ENST00000442962 1002 ntBASIC17.26■□□□□ 0.35
RAB11FIP4Q86YS3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms