Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 AC018629.1-201ENST00000623381 1736 ntBASIC16.36■□□□□ 0.21
TRIM50Q86XT4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 KRT18P36-201ENST00000411618 1276 ntBASIC16.36■□□□□ 0.21
TRIM50Q86XT4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 AC234782.1-201ENST00000451950 919 ntBASIC16.36■□□□□ 0.21
TRIM50Q86XT4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM50Q86XT4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 AC126177.1-201ENST00000547829 2218 ntBASIC16.35■□□□□ 0.21
TRIM50Q86XT4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 OR2I1P-209ENST00000641730 5365 ntBASIC16.35■□□□□ 0.21
TRIM50Q86XT4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 AC239868.1-201ENST00000369385 493 ntBASIC16.35■□□□□ 0.21
TRIM50Q86XT4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 IGLV3-15-201ENST00000518356 244 ntBASIC16.35■□□□□ 0.21
TRIM50Q86XT4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 MIR4706-201ENST00000582134 82 ntBASIC16.35■□□□□ 0.21
TRIM50Q86XT4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 AC007718.1-201ENST00000621078 280 ntBASIC16.35■□□□□ 0.21
TRIM50Q86XT4 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM50Q86XT4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms