Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 NUTM2HP-201ENST00000442076 2498 ntBASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 AC107890.1-201ENST00000422478 521 ntBASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 TSSK5P-201ENST00000423978 907 ntBASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 AP006288.1-201ENST00000446065 395 ntBASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 RN7SL399P-201ENST00000471648 279 ntBASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 AC103988.2-201ENST00000561804 725 ntBASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 AL138725.1-201ENST00000407347 1314 ntBASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRTM1Q86UE6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms