Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.85□□□□□ -0.51
VPS13CQ709C8 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
VPS13CQ709C8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.85□□□□□ -0.51
VPS13CQ709C8 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 AL121949.3-201ENST00000406684 385 ntBASIC11.85□□□□□ -0.51
VPS13CQ709C8 IGKV1OR-2-201ENST00000457995 350 ntBASIC11.85□□□□□ -0.51
VPS13CQ709C8 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.85□□□□□ -0.51
VPS13CQ709C8 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 AC106881.1-201ENST00000605849 3329 ntBASIC11.85□□□□□ -0.51
VPS13CQ709C8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13CQ709C8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.85□□□□□ -0.51
VPS13CQ709C8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.85□□□□□ -0.51
VPS13CQ709C8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13CQ709C8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
VPS13CQ709C8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13CQ709C8 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
VPS13CQ709C8 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13CQ709C8 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 MAGEA7P-201ENST00000436482 942 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 AC006328.1-201ENST00000437571 379 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 FAM86B3P-203ENST00000523992 854 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 AC023968.2-201ENST00000560593 1049 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 INO80E-209ENST00000567254 625 ntTSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 PSME2-217ENST00000615264 874 ntTSL 5 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 PSME2-218ENST00000630027 185 ntTSL 3 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 PIFO-201ENST00000369737 746 ntTSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 GNG10P1-201ENST00000452289 199 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 NT5C-204ENST00000578337 582 ntTSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 FBXO36P1-201ENST00000579006 471 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 RN7SL556P-201ENST00000582856 298 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 KRT8P43-201ENST00000406052 1458 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 AC073869.2-201ENST00000417338 1026 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 AHCYP3-201ENST00000420053 1279 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 STK24P1-201ENST00000455035 1291 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 AL136982.5-201ENST00000605222 294 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 AC010531.8-201ENST00000623341 685 ntBASIC11.84□□□□□ -0.51
VPS13CQ709C8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VPS13CQ709C8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.84□□□□□ -0.51
VPS13CQ709C8 LINC00265-2P-201ENST00000413372 782 ntBASIC11.83□□□□□ -0.51
VPS13CQ709C8 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC11.83□□□□□ -0.51
VPS13CQ709C8 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC11.83□□□□□ -0.51
VPS13CQ709C8 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC11.83□□□□□ -0.51
VPS13CQ709C8 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.83□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms