Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
FOXR1Q6PIV2 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
FOXR1Q6PIV2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 MEP1AP4-201ENST00000423244 1087 ntBASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 TIMM17BP1-201ENST00000545713 516 ntBASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 AC061975.2-201ENST00000581722 295 ntBASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 AC012617.1-204ENST00000586340 2305 ntBASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 AC004899.2-201ENST00000622993 3860 ntBASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXR1Q6PIV2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 AC126335.2-201ENST00000623362 4637 ntBASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 AC022210.1-201ENST00000449856 793 ntBASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 AL139010.1-201ENST00000454878 894 ntBASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 MIR4321-201ENST00000592276 80 ntBASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 AL512343.1-201ENST00000605837 169 ntBASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 AC244517.3-201ENST00000616254 1235 ntBASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXR1Q6PIV2 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 AC106818.1-201ENST00000623223 3242 ntBASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 TNN-202ENST00000621086 4234 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms