Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 AC010336.1-201ENST00000539278 4739 ntBASIC12.97□□□□□ -0.33
C11orf88Q6PI97 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.96□□□□□ -0.33
C11orf88Q6PI97 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.96□□□□□ -0.33
C11orf88Q6PI97 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 AC027369.6-201ENST00000525520 931 ntBASIC12.96□□□□□ -0.33
C11orf88Q6PI97 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf88Q6PI97 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf88Q6PI97 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 AC063926.2-201ENST00000623766 1308 ntBASIC12.95□□□□□ -0.34
C11orf88Q6PI97 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 AC130686.1-201ENST00000622936 2466 ntBASIC12.95□□□□□ -0.34
C11orf88Q6PI97 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 AC236430.1-201ENST00000402231 743 ntBASIC12.95□□□□□ -0.34
C11orf88Q6PI97 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 AL139010.1-201ENST00000454878 894 ntBASIC12.95□□□□□ -0.34
C11orf88Q6PI97 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 AC061975.2-201ENST00000581722 295 ntBASIC12.95□□□□□ -0.34
C11orf88Q6PI97 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms