Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 TBC1D27-202ENST00000424239 1573 ntBASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 AC004554.1-201ENST00000422830 1468 ntBASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 AC132872.4-202ENST00000622924 2756 ntBASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42BPAQ5VT25 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 GDNF-207ENST00000515058 764 ntTSL 5 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 AP005212.2-201ENST00000584979 510 ntBASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 PHB-210ENST00000511832 1509 ntTSL 2 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 AL022313.4-201ENST00000562756 2046 ntBASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 OR2W2P-201ENST00000406313 909 ntBASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 AC092903.1-201ENST00000466506 262 ntBASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 AC090136.2-201ENST00000517809 420 ntBASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 AC005274.1-201ENST00000623460 802 ntBASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPAQ5VT25 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 ZNF877P-201ENST00000437614 612 ntBASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 GOLGA2P8-201ENST00000505201 779 ntBASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 AC068831.5-201ENST00000557387 328 ntBASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CDC42BPAQ5VT25 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 RHOC-205ENST00000369636 786 ntTSL 2 BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 FAM21EP-201ENST00000417804 985 ntBASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 HLA-DPA2-205ENST00000433582 733 ntBASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 CD44-224ENST00000526669 870 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 MBP-238ENST00000580402 915 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms