Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.99□□□□□ -0.17
RIF1Q5UIP0 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 AC005777.1-201ENST00000588332 187 ntBASIC13.99□□□□□ -0.17
RIF1Q5UIP0 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 AL137244.1-201ENST00000422931 865 ntBASIC13.99□□□□□ -0.17
RIF1Q5UIP0 RN7SL564P-201ENST00000496309 250 ntBASIC13.99□□□□□ -0.17
RIF1Q5UIP0 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 AC113385.2-201ENST00000614465 762 ntBASIC13.99□□□□□ -0.17
RIF1Q5UIP0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 AC022211.2-201ENST00000585075 2527 ntBASIC13.98□□□□□ -0.17
RIF1Q5UIP0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 MIR339-201ENST00000362153 94 ntBASIC13.98□□□□□ -0.17
RIF1Q5UIP0 AL157823.1-201ENST00000403727 628 ntBASIC13.98□□□□□ -0.17
RIF1Q5UIP0 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 OR7E115P-201ENST00000382617 1024 ntBASIC13.98□□□□□ -0.17
RIF1Q5UIP0 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 AC007881.1-201ENST00000437460 187 ntBASIC13.98□□□□□ -0.17
RIF1Q5UIP0 SNRPD2P2-201ENST00000473818 333 ntBASIC13.98□□□□□ -0.17
RIF1Q5UIP0 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RIF1Q5UIP0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms