Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 LBH-202ENST00000401506 485 ntTSL 3 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 IGHJ2P-201ENST00000454480 60 ntBASIC20.12■□□□□ 0.81
CDCA8Q53HL2 TSACC-208ENST00000481479 741 ntTSL 2 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 POU5F1P2-201ENST00000521750 823 ntBASIC20.12■□□□□ 0.81
CDCA8Q53HL2 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 AC140658.4-201ENST00000561990 352 ntBASIC20.12■□□□□ 0.81
CDCA8Q53HL2 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 CU633904.3-201ENST00000624042 1029 ntBASIC20.12■□□□□ 0.81
CDCA8Q53HL2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
CDCA8Q53HL2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 AC232323.1-201ENST00000540724 2099 ntBASIC20.11■□□□□ 0.81
CDCA8Q53HL2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 RN7SL832P-201ENST00000607781 1756 ntBASIC20.11■□□□□ 0.81
CDCA8Q53HL2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
CDCA8Q53HL2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA8Q53HL2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms