Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 SPDYE19P-201ENST00000338590 713 ntBASIC13.11□□□□□ -0.31
ODF4Q2M2E3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 SPDYE22P-201ENST00000582158 798 ntBASIC13.11□□□□□ -0.31
ODF4Q2M2E3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 AL662799.1-202ENST00000614205 422 ntBASIC13.11□□□□□ -0.31
ODF4Q2M2E3 AC093512.1-201ENST00000617969 520 ntBASIC13.11□□□□□ -0.31
ODF4Q2M2E3 BX539320.1-201ENST00000623759 877 ntBASIC13.11□□□□□ -0.31
ODF4Q2M2E3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 KRT18P28-201ENST00000453838 1332 ntBASIC13.11□□□□□ -0.31
ODF4Q2M2E3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 AL645937.2-201ENST00000396808 931 ntBASIC13.1□□□□□ -0.31
ODF4Q2M2E3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 AC055876.3-201ENST00000431496 288 ntBASIC13.1□□□□□ -0.31
ODF4Q2M2E3 GNAQP1-201ENST00000444815 1067 ntBASIC13.1□□□□□ -0.31
ODF4Q2M2E3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 AC004890.2-204ENST00000481968 304 ntBASIC13.1□□□□□ -0.31
ODF4Q2M2E3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.1□□□□□ -0.31
ODF4Q2M2E3 AC138649.4-201ENST00000612222 287 ntBASIC13.1□□□□□ -0.31
ODF4Q2M2E3 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.1□□□□□ -0.31
ODF4Q2M2E3 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.1□□□□□ -0.31
ODF4Q2M2E3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.1□□□□□ -0.31
ODF4Q2M2E3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 CICP17-201ENST00000418553 2377 ntBASIC13.1□□□□□ -0.31
ODF4Q2M2E3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ODF4Q2M2E3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms