Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MIR1247-201ENST00000408206 136 ntBASIC13.49□□□□□ -0.25
LTBQ06643 POM121L8P-201ENST00000417732 1281 ntBASIC13.49□□□□□ -0.25
LTBQ06643 GPAA1P2-201ENST00000417923 928 ntBASIC13.49□□□□□ -0.25
LTBQ06643 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.49□□□□□ -0.25
LTBQ06643 AC007969.1-201ENST00000433675 447 ntBASIC13.49□□□□□ -0.25
LTBQ06643 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.49□□□□□ -0.25
LTBQ06643 POM121L9P-203ENST00000441984 1285 ntBASIC13.49□□□□□ -0.25
LTBQ06643 AC022447.6-201ENST00000515522 438 ntBASIC13.49□□□□□ -0.25
LTBQ06643 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.49□□□□□ -0.25
LTBQ06643 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.49□□□□□ -0.25
LTBQ06643 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 TDH-203ENST00000531764 1110 ntBASIC13.49□□□□□ -0.25
LTBQ06643 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.49□□□□□ -0.25
LTBQ06643 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.49□□□□□ -0.25
LTBQ06643 MIR5189-201ENST00000577370 114 ntBASIC13.49□□□□□ -0.25
LTBQ06643 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.49□□□□□ -0.25
LTBQ06643 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LTBQ06643 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.49□□□□□ -0.25
LTBQ06643 AL138709.1-201ENST00000614840 1693 ntBASIC13.49□□□□□ -0.25
LTBQ06643 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.49□□□□□ -0.25
LTBQ06643 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.49□□□□□ -0.25
LTBQ06643 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.49□□□□□ -0.25
LTBQ06643 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 AGGF1P1-201ENST00000509500 2073 ntBASIC13.49□□□□□ -0.25
LTBQ06643 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LTBQ06643 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
LTBQ06643 AC027601.5-201ENST00000624065 2482 ntBASIC13.49□□□□□ -0.25
LTBQ06643 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LTBQ06643 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LTBQ06643 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LTBQ06643 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LTBQ06643 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
LTBQ06643 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LTBQ06643 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.48□□□□□ -0.25
LTBQ06643 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LTBQ06643 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LTBQ06643 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.48□□□□□ -0.25
LTBQ06643 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.48□□□□□ -0.25
LTBQ06643 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.48□□□□□ -0.25
LTBQ06643 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.48□□□□□ -0.25
LTBQ06643 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 AC005229.1-201ENST00000392885 409 ntBASIC13.48□□□□□ -0.25
LTBQ06643 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.48□□□□□ -0.25
LTBQ06643 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LTBQ06643 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.48□□□□□ -0.25
LTBQ06643 AC099336.1-201ENST00000417053 1171 ntBASIC13.48□□□□□ -0.25
LTBQ06643 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.48□□□□□ -0.25
LTBQ06643 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.48□□□□□ -0.25
LTBQ06643 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LTBQ06643 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.48□□□□□ -0.25
LTBQ06643 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.48□□□□□ -0.25
LTBQ06643 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.48□□□□□ -0.25
LTBQ06643 AC106872.11-201ENST00000605838 421 ntBASIC13.48□□□□□ -0.25
LTBQ06643 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.48□□□□□ -0.25
LTBQ06643 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.48□□□□□ -0.25
LTBQ06643 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LTBQ06643 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LTBQ06643 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.48□□□□□ -0.25
LTBQ06643 INE2-201ENST00000630399 1874 ntBASIC13.48□□□□□ -0.25
LTBQ06643 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LTBQ06643 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.47□□□□□ -0.25
LTBQ06643 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LTBQ06643 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.47□□□□□ -0.25
LTBQ06643 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
LTBQ06643 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
LTBQ06643 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LTBQ06643 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.47□□□□□ -0.25
LTBQ06643 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms