Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 AL160191.2-201ENST00000603975 601 ntBASIC17.73■□□□□ 0.43
SCN7AQ01118 AL009176.1-201ENST00000607876 650 ntBASIC17.73■□□□□ 0.43
SCN7AQ01118 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.73■□□□□ 0.43
SCN7AQ01118 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.73■□□□□ 0.43
SCN7AQ01118 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.73■□□□□ 0.43
SCN7AQ01118 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.73■□□□□ 0.43
SCN7AQ01118 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
SCN7AQ01118 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN7AQ01118 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN7AQ01118 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 AL139158.3-201ENST00000641212 1562 ntBASIC17.72■□□□□ 0.43
SCN7AQ01118 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 AC138761.6-201ENST00000583997 1423 ntBASIC17.72■□□□□ 0.43
SCN7AQ01118 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 RN7SL832P-201ENST00000607781 1756 ntBASIC17.72■□□□□ 0.43
SCN7AQ01118 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SCN7AQ01118 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SCN7AQ01118 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN7AQ01118 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.72■□□□□ 0.43
SCN7AQ01118 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.72■□□□□ 0.43
SCN7AQ01118 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.72■□□□□ 0.43
SCN7AQ01118 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN7AQ01118 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN7AQ01118 AL049840.2-201ENST00000602722 535 ntBASIC17.72■□□□□ 0.43
SCN7AQ01118 AC006548.2-201ENST00000605217 529 ntBASIC17.72■□□□□ 0.43
SCN7AQ01118 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN7AQ01118 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN7AQ01118 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN7AQ01118 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SCN7AQ01118 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN7AQ01118 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SCN7AQ01118 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN7AQ01118 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SCN7AQ01118 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN7AQ01118 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN7AQ01118 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.71■□□□□ 0.43
SCN7AQ01118 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.71■□□□□ 0.43
SCN7AQ01118 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SCN7AQ01118 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.71■□□□□ 0.43
SCN7AQ01118 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.71■□□□□ 0.43
SCN7AQ01118 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 RN7SL375P-201ENST00000492442 298 ntBASIC17.71■□□□□ 0.43
SCN7AQ01118 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.71■□□□□ 0.43
SCN7AQ01118 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.71■□□□□ 0.43
SCN7AQ01118 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.71■□□□□ 0.43
SCN7AQ01118 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.71■□□□□ 0.43
SCN7AQ01118 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.71■□□□□ 0.43
SCN7AQ01118 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 AC068760.1-201ENST00000493579 1953 ntBASIC17.71■□□□□ 0.43
SCN7AQ01118 FKBP4P8-201ENST00000610931 1369 ntBASIC17.71■□□□□ 0.43
SCN7AQ01118 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC17.71■□□□□ 0.43
SCN7AQ01118 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN7AQ01118 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.71■□□□□ 0.43
SCN7AQ01118 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.71■□□□□ 0.43
SCN7AQ01118 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SCN7AQ01118 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCN7AQ01118 OR7E115P-201ENST00000382617 1024 ntBASIC17.71■□□□□ 0.42
SCN7AQ01118 AL451000.1-201ENST00000451300 1186 ntBASIC17.71■□□□□ 0.42
SCN7AQ01118 FAM86KP-201ENST00000509817 987 ntBASIC17.71■□□□□ 0.42
SCN7AQ01118 GOLGA2P7-209ENST00000560408 745 ntBASIC17.71■□□□□ 0.42
SCN7AQ01118 AP005212.2-201ENST00000584979 510 ntBASIC17.71■□□□□ 0.42
SCN7AQ01118 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.71■□□□□ 0.42
SCN7AQ01118 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
SCN7AQ01118 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.71■□□□□ 0.42
SCN7AQ01118 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.71■□□□□ 0.42
SCN7AQ01118 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCN7AQ01118 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN7AQ01118 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCN7AQ01118 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCN7AQ01118 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN7AQ01118 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SCN7AQ01118 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms