Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.11□□□□□ -0.31
EFNB1P98172 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNB1P98172 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNB1P98172 AL391280.1-201ENST00000506969 1062 ntBASIC13.11□□□□□ -0.31
EFNB1P98172 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNB1P98172 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 AC005586.2-201ENST00000563946 837 ntBASIC13.11□□□□□ -0.31
EFNB1P98172 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.11□□□□□ -0.31
EFNB1P98172 AC133539.2-201ENST00000604757 467 ntBASIC13.11□□□□□ -0.31
EFNB1P98172 AC079781.4-201ENST00000641908 219 ntBASIC13.11□□□□□ -0.31
EFNB1P98172 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
EFNB1P98172 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
EFNB1P98172 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNB1P98172 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNB1P98172 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNB1P98172 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
EFNB1P98172 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
EFNB1P98172 AC009093.2-202ENST00000620513 2079 ntBASIC13.11□□□□□ -0.31
EFNB1P98172 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.11□□□□□ -0.31
EFNB1P98172 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
EFNB1P98172 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.11□□□□□ -0.31
EFNB1P98172 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB1P98172 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.1□□□□□ -0.31
EFNB1P98172 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
EFNB1P98172 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
EFNB1P98172 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.1□□□□□ -0.31
EFNB1P98172 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 USP17L6P-201ENST00000382470 1197 ntBASIC13.1□□□□□ -0.31
EFNB1P98172 RN7SKP175-201ENST00000408472 289 ntBASIC13.1□□□□□ -0.31
EFNB1P98172 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.1□□□□□ -0.31
EFNB1P98172 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 AC093433.1-201ENST00000458048 571 ntBASIC13.1□□□□□ -0.31
EFNB1P98172 FTLP10-202ENST00000505798 471 ntBASIC13.1□□□□□ -0.31
EFNB1P98172 KRT18P25-201ENST00000508931 1278 ntBASIC13.1□□□□□ -0.31
EFNB1P98172 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.1□□□□□ -0.31
EFNB1P98172 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.1□□□□□ -0.31
EFNB1P98172 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.1□□□□□ -0.31
EFNB1P98172 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
EFNB1P98172 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.1□□□□□ -0.31
EFNB1P98172 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 AP002761.4-201ENST00000565433 3361 ntBASIC13.1□□□□□ -0.31
EFNB1P98172 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
EFNB1P98172 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
EFNB1P98172 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.1□□□□□ -0.31
EFNB1P98172 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
EFNB1P98172 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB1P98172 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB1P98172 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms