Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX6-1P78426 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX6-1P78426 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX6-1P78426 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX6-1P78426 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX6-1P78426 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX6-1P78426 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 POM121L10P-201ENST00000436994 1285 ntBASIC13.07□□□□□ -0.32
NKX6-1P78426 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX6-1P78426 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
NKX6-1P78426 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.07□□□□□ -0.32
NKX6-1P78426 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NKX6-1P78426 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX6-1P78426 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
NKX6-1P78426 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 AC005252.3-201ENST00000623855 2258 ntBASIC13.07□□□□□ -0.32
NKX6-1P78426 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 AL359183.1-201ENST00000623796 2132 ntBASIC13.07□□□□□ -0.32
NKX6-1P78426 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NKX6-1P78426 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX6-1P78426 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-1P78426 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-1P78426 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX6-1P78426 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NKX6-1P78426 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX6-1P78426 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-1P78426 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-1P78426 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.06□□□□□ -0.32
NKX6-1P78426 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 AP000845.1-201ENST00000581677 2131 ntBASIC13.06□□□□□ -0.32
NKX6-1P78426 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX6-1P78426 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NKX6-1P78426 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 TPM3P8-201ENST00000330554 643 ntBASIC13.06□□□□□ -0.32
NKX6-1P78426 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX6-1P78426 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NKX6-1P78426 MIR769-201ENST00000390225 118 ntBASIC13.06□□□□□ -0.32
NKX6-1P78426 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
NKX6-1P78426 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
NKX6-1P78426 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
NKX6-1P78426 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.06□□□□□ -0.32
NKX6-1P78426 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.06□□□□□ -0.32
NKX6-1P78426 AL133466.1-201ENST00000447582 150 ntBASIC13.06□□□□□ -0.32
NKX6-1P78426 AC126915.1-201ENST00000522847 1038 ntBASIC13.06□□□□□ -0.32
NKX6-1P78426 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.06□□□□□ -0.32
NKX6-1P78426 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-1P78426 MIR3619-201ENST00000579667 83 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms