Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 AC063926.2-201ENST00000623766 1308 ntBASIC13.85□□□□□ -0.19
TRA2BP62995 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRA2BP62995 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRA2BP62995 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRA2BP62995 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.85□□□□□ -0.19
TRA2BP62995 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRA2BP62995 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRA2BP62995 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
TRA2BP62995 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.84□□□□□ -0.19
TRA2BP62995 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.84□□□□□ -0.19
TRA2BP62995 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.84□□□□□ -0.19
TRA2BP62995 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 AC079776.1-201ENST00000401540 1152 ntBASIC13.84□□□□□ -0.19
TRA2BP62995 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.84□□□□□ -0.19
TRA2BP62995 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.84□□□□□ -0.19
TRA2BP62995 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
TRA2BP62995 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.84□□□□□ -0.19
TRA2BP62995 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.84□□□□□ -0.19
TRA2BP62995 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.84□□□□□ -0.19
TRA2BP62995 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 AP006547.1-201ENST00000563435 692 ntBASIC13.84□□□□□ -0.19
TRA2BP62995 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.84□□□□□ -0.19
TRA2BP62995 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 AC244157.2-201ENST00000616239 1006 ntBASIC13.84□□□□□ -0.19
TRA2BP62995 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
TRA2BP62995 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 HSPA8P5-201ENST00000456928 2069 ntBASIC13.84□□□□□ -0.19
TRA2BP62995 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 TUBB8P4-201ENST00000511806 1324 ntBASIC13.84□□□□□ -0.19
TRA2BP62995 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRA2BP62995 BEND3P1-201ENST00000421591 1944 ntBASIC13.84□□□□□ -0.19
TRA2BP62995 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.84□□□□□ -0.19
TRA2BP62995 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRA2BP62995 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.84□□□□□ -0.19
TRA2BP62995 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
TRA2BP62995 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.83□□□□□ -0.19
TRA2BP62995 KRT8P24-201ENST00000560290 1559 ntBASIC13.83□□□□□ -0.19
TRA2BP62995 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRA2BP62995 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
TRA2BP62995 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.83□□□□□ -0.19
TRA2BP62995 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.83□□□□□ -0.19
TRA2BP62995 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.83□□□□□ -0.19
TRA2BP62995 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.83□□□□□ -0.2
TRA2BP62995 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRA2BP62995 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRA2BP62995 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRA2BP62995 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.83□□□□□ -0.2
TRA2BP62995 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.83□□□□□ -0.2
TRA2BP62995 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRA2BP62995 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRA2BP62995 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRA2BP62995 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRA2BP62995 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRA2BP62995 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.83□□□□□ -0.2
TRA2BP62995 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRA2BP62995 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms