Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13□□□□□ -0.33
RAB1AP62820 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13□□□□□ -0.33
RAB1AP62820 AL136172.1-201ENST00000598590 1394 ntBASIC13□□□□□ -0.33
RAB1AP62820 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RAB1AP62820 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13□□□□□ -0.33
RAB1AP62820 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13□□□□□ -0.33
RAB1AP62820 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAB1AP62820 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 AC004945.1-201ENST00000416738 983 ntBASIC13□□□□□ -0.33
RAB1AP62820 HOMER2P2-201ENST00000451621 847 ntBASIC13□□□□□ -0.33
RAB1AP62820 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13□□□□□ -0.33
RAB1AP62820 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13□□□□□ -0.33
RAB1AP62820 AC131206.1-201ENST00000538078 1211 ntBASIC13□□□□□ -0.33
RAB1AP62820 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13□□□□□ -0.33
RAB1AP62820 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13□□□□□ -0.33
RAB1AP62820 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13□□□□□ -0.33
RAB1AP62820 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RAB1AP62820 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13□□□□□ -0.33
RAB1AP62820 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13□□□□□ -0.33
RAB1AP62820 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13□□□□□ -0.33
RAB1AP62820 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAB1AP62820 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13□□□□□ -0.33
RAB1AP62820 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13□□□□□ -0.33
RAB1AP62820 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB1AP62820 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAB1AP62820 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
RAB1AP62820 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
RAB1AP62820 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RAB1AP62820 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RAB1AP62820 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 AC079781.5-202ENST00000641784 3743 ntBASIC12.99□□□□□ -0.33
RAB1AP62820 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB1AP62820 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 KRT8P4-201ENST00000509735 1454 ntBASIC12.99□□□□□ -0.33
RAB1AP62820 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.99□□□□□ -0.33
RAB1AP62820 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RAB1AP62820 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.99□□□□□ -0.33
RAB1AP62820 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB1AP62820 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RAB1AP62820 AC099336.1-201ENST00000417053 1171 ntBASIC12.99□□□□□ -0.33
RAB1AP62820 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB1AP62820 YBX1P6-201ENST00000442962 1002 ntBASIC12.99□□□□□ -0.33
RAB1AP62820 AC119751.2-201ENST00000504529 210 ntBASIC12.99□□□□□ -0.33
RAB1AP62820 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB1AP62820 AP003171.2-201ENST00000528208 925 ntBASIC12.99□□□□□ -0.33
RAB1AP62820 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB1AP62820 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RAB1AP62820 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB1AP62820 C2orf69P2-201ENST00000562032 1123 ntBASIC12.99□□□□□ -0.33
RAB1AP62820 MIR4259-201ENST00000584466 101 ntBASIC12.99□□□□□ -0.33
RAB1AP62820 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB1AP62820 AC073413.1-201ENST00000603927 732 ntBASIC12.99□□□□□ -0.33
RAB1AP62820 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.99□□□□□ -0.33
RAB1AP62820 ZACNP1-201ENST00000612259 710 ntBASIC12.99□□□□□ -0.33
RAB1AP62820 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB1AP62820 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RAB1AP62820 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RAB1AP62820 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 AC092135.3-201ENST00000624151 1846 ntBASIC12.99□□□□□ -0.33
RAB1AP62820 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB1AP62820 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB1AP62820 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RAB1AP62820 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB1AP62820 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB1AP62820 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB1AP62820 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms