Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.91□□□□□ -0.18
RPS3AP61247 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
RPS3AP61247 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.91□□□□□ -0.18
RPS3AP61247 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.91□□□□□ -0.18
RPS3AP61247 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.91□□□□□ -0.18
RPS3AP61247 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.91□□□□□ -0.18
RPS3AP61247 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.91□□□□□ -0.18
RPS3AP61247 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 AC124283.3-201ENST00000570869 594 ntBASIC13.91□□□□□ -0.18
RPS3AP61247 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.91□□□□□ -0.18
RPS3AP61247 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RPS3AP61247 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.91□□□□□ -0.18
RPS3AP61247 AC025181.2-201ENST00000606994 802 ntBASIC13.91□□□□□ -0.18
RPS3AP61247 AC107373.2-201ENST00000607735 490 ntBASIC13.91□□□□□ -0.18
RPS3AP61247 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.91□□□□□ -0.18
RPS3AP61247 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.91□□□□□ -0.18
RPS3AP61247 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RPS3AP61247 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.91□□□□□ -0.18
RPS3AP61247 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.91□□□□□ -0.18
RPS3AP61247 BEND3P3-201ENST00000611030 2440 ntBASIC13.91□□□□□ -0.18
RPS3AP61247 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.91□□□□□ -0.18
RPS3AP61247 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RPS3AP61247 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RPS3AP61247 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RPS3AP61247 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.9□□□□□ -0.18
RPS3AP61247 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RPS3AP61247 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
RPS3AP61247 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
RPS3AP61247 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.9□□□□□ -0.18
RPS3AP61247 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.9□□□□□ -0.18
RPS3AP61247 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.9□□□□□ -0.18
RPS3AP61247 AC009486.1-201ENST00000569860 813 ntBASIC13.9□□□□□ -0.18
RPS3AP61247 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.9□□□□□ -0.18
RPS3AP61247 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 AC010319.3-201ENST00000597028 470 ntBASIC13.9□□□□□ -0.18
RPS3AP61247 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.9□□□□□ -0.18
RPS3AP61247 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RPS3AP61247 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.9□□□□□ -0.18
RPS3AP61247 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.9□□□□□ -0.18
RPS3AP61247 AL118506.1-201ENST00000601296 3082 ntBASIC13.9□□□□□ -0.18
RPS3AP61247 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.9□□□□□ -0.18
RPS3AP61247 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms