Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC008805.1-201ENST00000590892 364 ntBASIC14.55□□□□□ -0.08
SRP54P61011 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.55□□□□□ -0.08
SRP54P61011 AC026740.1-201ENST00000607068 791 ntBASIC14.55□□□□□ -0.08
SRP54P61011 MIR6720-201ENST00000611664 98 ntBASIC14.55□□□□□ -0.08
SRP54P61011 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.55□□□□□ -0.08
SRP54P61011 AC100757.4-201ENST00000626934 759 ntBASIC14.55□□□□□ -0.08
SRP54P61011 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
SRP54P61011 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP54P61011 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP54P61011 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP54P61011 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP54P61011 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP54P61011 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SRP54P61011 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP54P61011 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP54P61011 AC013268.4-201ENST00000637413 2228 ntBASIC14.55□□□□□ -0.08
SRP54P61011 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
SRP54P61011 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP54P61011 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
SRP54P61011 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP54P61011 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.55□□□□□ -0.08
SRP54P61011 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP54P61011 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SRP54P61011 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.55□□□□□ -0.08
SRP54P61011 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
SRP54P61011 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SRP54P61011 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SRP54P61011 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.54□□□□□ -0.08
SRP54P61011 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SRP54P61011 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 MARK2P5-201ENST00000507649 634 ntBASIC14.54□□□□□ -0.08
SRP54P61011 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
SRP54P61011 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
SRP54P61011 RN7SL774P-201ENST00000577467 290 ntBASIC14.54□□□□□ -0.08
SRP54P61011 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.54□□□□□ -0.08
SRP54P61011 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
SRP54P61011 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.54□□□□□ -0.08
SRP54P61011 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.54□□□□□ -0.08
SRP54P61011 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SRP54P61011 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 AC006486.2-201ENST00000624246 2199 ntBASIC14.54□□□□□ -0.08
SRP54P61011 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.54□□□□□ -0.08
SRP54P61011 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SRP54P61011 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
SRP54P61011 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.54□□□□□ -0.08
SRP54P61011 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SRP54P61011 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP54P61011 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.53□□□□□ -0.08
SRP54P61011 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.53□□□□□ -0.08
SRP54P61011 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.53□□□□□ -0.08
SRP54P61011 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SRP54P61011 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.53□□□□□ -0.08
SRP54P61011 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.53□□□□□ -0.08
SRP54P61011 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SRP54P61011 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.53□□□□□ -0.08
SRP54P61011 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.53□□□□□ -0.08
SRP54P61011 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.53□□□□□ -0.08
SRP54P61011 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SRP54P61011 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP54P61011 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms